The Thule's SlideLock lid is the reason people pay the premium. It lifts with one hand from either side, the handle shows red until the lid is fully latched, and the key cannot be pulled until the box is shut. BetterTrail calls it one of the simplest locking systems it has used; GearJunkie notes the handle is reachable from the ground on a tall SUV. The Yakima's metal handle needs a firmer push to release, per BetterTrail, and OutdoorGearLab found its closed indicator less foolproof. The Thule also opens 2 in higher, 14 in against 12 in by BetterTrail's tape, the difference between sliding a cooler under the lid and lifting it over.
Neither lid is flawless: BetterTrail found the Thule's latch finicky when the box is moderately full, sometimes needing a press at all three latch points, and Switchback Travel found the same hardware stiffer in cold weather on the Low version.
On noise, BetterTrail describes the Motion 3 XL as stable on the highway with minimal wind noise, while Switchback Travel lists road noise compared with sleeker designs as the Yakima's main weakness, blaming its blunter nose. Neither measured decibels; vehicle shape and crossbar type usually matter more.